Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066794Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
c15h17orf49
Zgc:103508.
  
  
 
0.902
bptf
Bromodomain PHD finger transcription factor.
    
 0.813
LOC101078073
Bromodomain PHD finger transcription factor.
    
 0.813
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.733
hmgxb4
HMG box domain containing 4a.
    
 
 0.669
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.658
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
     
 0.573
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
     
 0.569
LOC101067848
Chromatin accessibility complex subunit 1.
   
 
  0.558
ENSTRUP00000024880
Remodeling and spacing factor 1b, tandem duplicate 1.
   
 
  0.549
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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