Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc4a1apSolute carrier family 4 member 1 adaptor protein. (794 aa)    
Predicted Functional Partners:
zrsr2
U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein.
   
   0.906
osgep
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
      
 0.874
phf5a
PHD finger protein 5A.
    
 
 0.794
ENSTRUP00000000150
Small nuclear ribonucleoprotein polypeptide A.
    
   0.788
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
    
   0.788
LOC101063274
Uncharacterized protein.
   
   0.773
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
   
   0.773
dnajc8
J domain-containing protein.
    
   0.737
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
   0.635
exosc9
Exosome component 9.
    
   0.624
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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