Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
tbrg1Transforming growth factor beta regulator 1. (518 aa)    
Predicted Functional Partners:
tsku
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
      
 0.838
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
   
  
 0.795
cops2
COP9 signalosome subunit 2.
   
  
 0.790
hspa13
Heat shock protein 70 family, member 13.
    
 
 0.774
fbxo3
F-box protein 3.
      
 0.740
p2ry6
Pyrimidinergic receptor P2Y6.
      
 0.729
p2ry2
Purinergic receptor P2Y2, tandem duplicate 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.726
chfr
Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase.
     
 0.725
trappc10
Trafficking protein particle complex 10.
      
 0.719
rb1cc1
RB1-inducible coiled-coil 1.
   
 
 0.717
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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