STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
syne3Spectrin repeat containing, nuclear envelope family member 3. (1046 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.579
sun1
Sad1 and UNC84 domain containing 1.
    
 0.555
LOC105417877
SUN domain-containing protein.
    
 0.555
LOC115253298
SUN domain-containing protein 1-like.
    
 0.555
sun2
SUN domain-containing protein.
    
 0.555
ENSTRUP00000068811
Uncharacterized protein LOC101073982.
   
  0.545
ENSTRUP00000087281
Calponin-homology (CH) domain-containing protein.
   
  0.545
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]