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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc33a1Solute carrier family 33 member 1. (584 aa)    
Predicted Functional Partners:
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.912
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.900
ppcs
Phosphopantothenoylcysteine synthetase.
 
    
 0.711
dnajb9
DnaJ heat shock protein family (Hsp40) member B9b.
   
 
 0.675
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
  
 0.576
amd1
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.568
LOC105417809
J domain-containing protein.
   
 
 0.557
ak9
Adenylate kinase 9.
      
 0.499
PC
Pyruvate carboxylase.
   
  
 0.499
LOC101076141
Patatin-like phospholipase domain containing 6.
     
 0.490
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.