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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parp16Poly [ADP-ribose] polymerase. (328 aa)    
Predicted Functional Partners:
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 0.686
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.578
ENSTRUP00000067043
Protein mono-ADP-ribosyltransferase PARP14-like isoform X1.
      
 0.566
Parp4
Uncharacterized protein.
      
 0.566
parp2
Poly [ADP-ribose] polymerase.
      
 0.562
PARP11
Poly [ADP-ribose] polymerase.
      
 0.550
wdr59
WD repeat domain 59.
    
 0.473
wdr24
WD repeat domain 24.
    
 0.473
rnf13
Ring finger protein 13.
    
 
 0.445
parp12
Poly (ADP-ribose) polymerase family, member 12a.
      
 0.406
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.