STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
parp16Poly [ADP-ribose] polymerase. (328 aa)    
Predicted Functional Partners:
cog1
Component of oligomeric golgi complex 1.
    
   0.819
ENSTRUP00000067043
Protein mono-ADP-ribosyltransferase PARP14-like isoform X1.
      
 0.746
Parp4
Uncharacterized protein.
      
 0.735
COG5
Component of oligomeric golgi complex 5.
    
   0.726
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
   
 0.724
parp2
Poly [ADP-ribose] polymerase.
      
 0.709
ddrgk1
Uncharacterized protein.
      
 0.702
PARP11
Poly [ADP-ribose] polymerase.
      
 0.654
wdr59
WD repeat domain 59.
    
 0.644
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.642
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.