Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2SQJ2_TAKRUOlfactory marker protein a. (165 aa)    
Predicted Functional Partners:
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.543
LOC101075804
Vertebrate ancient long opsin b.
      
 0.540
ccnf
Cyclin F; Belongs to the cyclin family.
      
 0.526
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
      
 0.515
LOC105419503
Uncharacterized protein LOC105419503 isoform X1.
      
 0.515
LOC101073072
Teleost multiple tissue opsin b; Belongs to the G-protein coupled receptor 1 family.
      
 0.478
hjv
Hemojuvelin BMP co-receptor.
      
 0.476
Gap43
Neuromodulin_N domain-containing protein.
      
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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