Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
pdap1Pdgfa associated protein 1b. (186 aa)    
Predicted Functional Partners:
eif1ax
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.683
LOC101080000
MORC family CW-type zinc finger 2.
      
 0.546
Serf2
Small EDRK-rich factor 2.
   
  
 0.542
rcn2
Reticulocalbin 2.
   
  
 0.535
LOC101079876
ANK_REP_REGION domain-containing protein.
      
 0.528
LOC101068604
Glutaminase a.
      
 0.528
LOC101063539
Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.509
tbck
TBC1 domain containing kinase.
      
 0.495
ENSTRUP00000072037
annotation not available
      
 0.491
dap
Death-associated protein.
      
 0.476
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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