Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068904Uncharacterized protein. (316 aa)    
Predicted Functional Partners:
LOC101078584
Dystroglycan 1.
   
 0.855
LOC101073584
Peptidase S72 domain-containing protein.
   
 0.855
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.780
nid1
Nidogen 1a.
   
 0.653
ENSTRUP00000051666
Nidogen 2a (osteonidogen).
   
 0.653
tinagl1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
   
 
 0.563
sspn
Sarcospan (Kras oncogene-associated gene).
     
 0.541
LOC101063377
Decorin; May affect the rate of fibrils formation.
   
 
 0.509
nudcd1
Uncharacterized protein.
    
   0.506
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.476
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (32%) [HD]