STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMNL1FH2 domain-containing protein. (1047 aa)    
Predicted Functional Partners:
LOC101073733
Uncharacterized protein.
   
 0.736
LOC101067723
Cell division cycle 42.
   
 0.736
LOC101068145
Uncharacterized protein.
   
 0.712
dusp27
Dual specificity phosphatase 27; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.639
klhl38
Kelch-like family member 38b.
      
 0.599
RAC1
Uncharacterized protein.
   
 0.578
LOC101067160
Rac family small GTPase 1b.
   
 0.578
ENSTRUP00000064457
Ras-related C3 botulinum toxin substrate 3 isoform X1.
   
 0.578
rac2
Rac family small GTPase 2.
   
 0.578
LOC101076147
Uncharacterized protein.
   
 0.531
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.