Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075908Si:ch1073-513e17.1. (522 aa)    
Predicted Functional Partners:
slc17a5
Solute carrier family 17 member 5.
  
  
 
0.903
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.649
H2RKX3_TAKRU
Uncharacterized protein.
    
 
 0.622
evc
Uncharacterized protein.
      
 0.607
brap
BRCA1 associated protein.
      
 0.576
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.550
LOC101070963
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
     
 0.529
LOC101064537
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.514
st6galnac3
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.514
ctns
Cystinosin, lysosomal cystine transporter.
      
 0.511
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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