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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067604Cyclin-dependent kinase 11B. (812 aa)    
Predicted Functional Partners:
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
 
 0.688
ccnc
Cyclin C; Belongs to the cyclin family.
     
 0.632
LOC101066249
Centromere protein J.
   
 0.593
cep135
Centrosomal protein 135.
    
 0.590
haus8
Si:ch211-153a8.4.
     
 0.588
ENSTRUP00000087241
annotation not available
     
 0.570
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
   
 
  0.561
cep78
Uncharacterized protein.
     
 0.560
cep131
Centrosomal protein 131.
    
 0.557
srgap2
SLIT-ROBO Rho GTPase activating protein 2.
   
  
 0.554
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.