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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074767ATP-binding cassette, sub-family A (ABC1), member 5. (1680 aa)    
Predicted Functional Partners:
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
      
 0.654
apoA-IV4
Apolipoprotein A-IV4.
    
 0.544
apoa-iv3
Uncharacterized protein.
    
 0.544
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.540
abcf3
ATP-binding cassette, sub-family F (GCN20), member 3.
    
 
 0.532
apoa-i
Uncharacterized protein.
    
 0.523
LOC101073582
Nuclear receptor subfamily 1, group H, member 5.
   
 0.498
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 0.498
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.495
abcc9
ATP-binding cassette, sub-family C (CFTR/MRP), member 9.
  
0.467
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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