Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101074767ATP-binding cassette, sub-family A (ABC1), member 5. (1680 aa)    
Predicted Functional Partners:
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
      
 0.772
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
    
 
0.662
abcb11
ATP-binding cassette, sub-family B (MDR/TAP), member 11a.
  
0.646
LOC101069556
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.627
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.594
LOC101073582
Nuclear receptor subfamily 1, group H, member 5.
   
 0.592
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 0.592
apoA-IV4
Apolipoprotein A-IV4.
    
 0.589
apoa-iv3
Uncharacterized protein.
    
 0.589
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.588
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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