Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sppl2aUncharacterized protein. (534 aa)    
Predicted Functional Partners:
slc31a2
Solute carrier family 31 member 2.
      
 0.635
rps21
Ribosomal protein S21.
      
 0.620
mxd1
MAX dimerization protein 1.
      
 0.617
mxd4
MAX dimerization protein 4.
      
 0.605
rrbp1
Rib_recp_KP_reg domain-containing protein.
    
 
 0.590
LOC101069388
Max-interacting protein 1-like isoform X1.
      
 0.585
nfyb
Nuclear transcription factor Y, beta a.
      
 0.567
tnip1
TNFAIP3 interacting protein 1.
      
 0.564
mxd3
MAX dimerization protein 3.
      
 0.550
spata18
Spermatogenesis associated 18.
      
 0.543
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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