STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb1Ankyrin repeat and SOCS box containing 1. (350 aa)    
Predicted Functional Partners:
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.976
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.921
LOC101070508
Elongin-B isoform X1.
    
 0.884
LOC101068670
Ubiquitin-like domain-containing protein.
    
 0.884
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.825
rnf7
Ring finger protein 7.
    
 0.741
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.712
kctd7
Potassium channel tetramerization domain containing 7.
     
 0.658
asb10
Ankyrin repeat and SOCS box containing 10.
  
  
0.635
LOC101077597
Platelet endothelial aggregation receptor 1-like.
    
 0.602
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.