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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt9Nudix (nucleoside diphosphate linked moiety X)-type motif 9. (351 aa)    
Predicted Functional Partners:
Nudt5
ADP-sugar pyrophosphatase / 8-oxo-dGDP phosphatase / ADP-D-ribose pyrophosphorylase.
    
 0.959
trpm5
Transient receptor potential cation channel, subfamily M, member 5.
 
   
 0.924
LOC101076743
Phosphoribosyl pyrophosphate synthetase 1B.
     
 0.912
LOC101066493
Phosphoribosyl pyrophosphate synthetase 2.
     
 0.912
LOC101076683
Uncharacterized protein; Belongs to the phosphohexose mutase family.
     
  0.900
pgm2
Phosphoglucomutase 2.
     
  0.900
LOC101061927
Histidine rich calcium binding protein.
 
   
 0.883
TRPM1
Transient receptor potential cation channel subfamily M member 1.
 
   
 0.844
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
 
   
 0.808
LOC101071857
Transient receptor potential cation channel, subfamily M, member 6.
 
   
 0.799
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.