Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nudt9Nudix (nucleoside diphosphate linked moiety X)-type motif 9. (351 aa)    
Predicted Functional Partners:
Nudt5
ADP-sugar pyrophosphatase / 8-oxo-dGDP phosphatase / ADP-D-ribose pyrophosphorylase.
    
 0.982
trpm5
Transient receptor potential cation channel, subfamily M, member 5.
 
   
 0.932
LOC101076743
Phosphoribosyl pyrophosphate synthetase 1B.
     
 0.925
LOC101066493
Phosphoribosyl pyrophosphate synthetase 2.
     
 0.925
pgm2
Phosphoglucomutase 2.
     
 0.912
LOC101076683
Uncharacterized protein; Belongs to the phosphohexose mutase family.
     
 0.903
LOC101061927
Histidine rich calcium binding protein.
 
   
 0.895
TRPM1
Transient receptor potential cation channel subfamily M member 1.
 
   
 0.869
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
 
   
 0.847
LOC101071857
Transient receptor potential cation channel, subfamily M, member 6.
 
   
 0.843
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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