Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSTRUP00000014882Si:dkey-14o18.2. (350 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.784
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.765
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.728
eprs1
Glutamyl-prolyl-tRNA synthetase.
   
   0.726
rps27a
Ribosomal protein S27a.
    
 0.676
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.641
vars1
Valine--tRNA ligase.
    
   0.546
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.530
alyref
RRM domain-containing protein.
    
 
 0.522
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
    
 
 0.522
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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