Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ninlNinein-like. (1495 aa)    
Predicted Functional Partners:
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 
 0.723
LOC101066651
CAP-Gly domain-containing protein.
    
 
 0.703
ENSTRUP00000085655
Dynactin subunit 1-like isoform X1.
    
 
 0.703
mcm7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
      
 0.700
plk3
Serine/threonine-protein kinase PLK.
    
 0.655
bbs4
Bardet-Biedl syndrome 4.
    
 
 0.655
plk4
Polo-like kinase 4 (Drosophila).
    
 0.652
LOC101065819
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 
 0.646
arl13b
Uncharacterized protein.
      
 0.646
unc45b
Unc-45 myosin chaperone B.
    
 
 0.646
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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