Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064284Protocadherin 7a. (1370 aa)    
Predicted Functional Partners:
PCDH20
Protocadherin 20.
   
  0.602
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
  0.480
LOC101075584
Integrin beta; Belongs to the integrin beta chain family.
    
 0.470
itgb5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.470
daam1
Dishevelled associated activator of morphogenesis 1b.
    
  0.426
lhfpl2
LHFPL tetraspan subfamily member 2a.
    
  0.418
LOC101075265
Uncharacterized protein.
    
  0.418
LOC101069918
Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
  0.416
LOC101079931
Junction plakoglobin a.
    
 0.411
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
    
 0.411
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.