STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062176Forkhead box J2. (582 aa)    
Predicted Functional Partners:
LOC101063506
Receptor protein-tyrosine kinase.
    
 0.763
mlf2
Myeloid leukemia factor 2.
    
 
 0.644
ENSTRUP00000059190
Kell metallo-endopeptidase (Kell blood group).
      
 0.597
LOC115248663
Kell blood group glycoprotein-like isoform X1.
      
 0.597
mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.578
ssh1
Slingshot protein phosphatase 1a.
    
 0.547
H2RPX4_TAKRU
ER membrane protein complex subunit 6.
   
  
 0.520
atn1
Atrophin 1.
    
 
 0.447
LOC101074077
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 
 0.447
rere
Arginine-glutamic acid dipeptide (RE) repeats a.
    
 
 0.447
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.