Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhdc4Kelch domain containing 4. (588 aa)    
Predicted Functional Partners:
shcbp1
SHC SH2-domain binding protein 1.
      
 0.700
gcc1
GRIP and coiled-coil domain containing 1.
   
   0.645
pno1
Partner of NOB1 homolog.
   
   0.645
ENSTRUP00000062730
Nucleic_acid_bd domain-containing protein.
   
   0.645
ENSTRUP00000051488
DUF4536 domain-containing protein.
      
 0.644
znf185
Zinc finger protein 185 isoform X1.
      
 0.644
ARMC6
Armadillo repeat containing 6.
      
 0.640
cebpz
CCAAT enhancer binding protein zeta.
   
    0.635
crot
Carnitine O-octanoyltransferase.
    
   0.632
utp6
UTP6 small subunit processome component.
   
    0.600
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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