STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062006Cdk5 and Abl enzyme substrate 2a; Belongs to the cyclin family. (509 aa)    
Predicted Functional Partners:
cdk5
Cyclin-dependent kinase 5.
    
 0.738
ccna2
Cyclin A2; Belongs to the cyclin family.
     
 0.510
ccna1
Cyclin-A1 isoform X1.
     
 0.510
LOC101072140
Cyclin dependent kinase 18.
   
 0.485
ccnj
Cyclin J; Belongs to the cyclin family.
     
 0.474
LOC101064374
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.462
cdk6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.462
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
   
 0.462
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.462
ENSTRUP00000085951
annotation not available
   
 0.462
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.