STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074111Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family. (406 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.794
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
     
 0.641
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.620
TMEM43
Uncharacterized protein.
      
 0.605
rrp36
Ribosomal RNA processing 36.
      
 0.602
ccdc36
Interactor of HORMAD1 protein 1 isoform X1.
      
 0.589
rab11fip3
RAB11 family interacting protein 3 (class II).
      
 0.588
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.583
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.579
LOC101079770
BTB domain-containing protein; Belongs to the potassium channel family.
    
  0.576
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.