Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lrrc10bUncharacterized protein. (292 aa)    
Predicted Functional Partners:
fmod
Fibromodulin b.
  
     0.530
LOC101067487
Si:dkey-90m5.4.
  
     0.526
LOC101075704
Leucine-rich repeat transmembrane neuronal protein 4-like.
  
     0.522
LOC101063377
Decorin; May affect the rate of fibrils formation.
  
     0.513
LOC105419420
GLI pathogenesis-related 1a; Belongs to the CRISP family.
      
 0.509
prelp
Proline/arginine-rich end leucine-rich repeat protein.
  
     0.497
LOC101075258
Zgc:113307.
  
     0.492
LOC101073264
Si:dkey-28o19.1.
  
   
 0.491
LOC101077508
Keratocan.
  
    0.490
H2RU59_TAKRU
LRRCT domain-containing protein.
  
     0.486
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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