Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101077796Procollagen C-endopeptidase enhancer 2. (817 aa)    
Predicted Functional Partners:
ENSTRUP00000085046
annotation not available
   
 0.654
LOC101068949
Metalloendopeptidase.
   
 0.654
tll1
Metalloendopeptidase.
   
 0.654
amn
Amnion associated transmembrane protein.
   
 0.652
LOC101072844
Bone morphogenetic protein 1-like isoform X1.
   
 0.553
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.462
mst1r
Macrophage stimulating 1 receptor b.
    
 0.462
met
Uncharacterized protein.
    
 0.462
LOC101068717
Von Hippel-Lindau tumor suppressor.
      
 0.429
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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