Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sass6SAS-6 centriolar assembly protein. (590 aa)    
Predicted Functional Partners:
stil
STIL centriolar assembly protein.
   
 
 0.976
LOC101066249
Centromere protein J.
   
 
 0.970
plk4
Polo-like kinase 4 (Drosophila).
   
 
 0.944
Fancm
ERCC4 domain-containing protein.
   
 0.898
LOC105417636
Uncharacterized protein LOC105417636.
   
  
 0.874
dna2
DNA replication helicase/nuclease 2.
   
 0.866
rpa3
Replication protein A3.
   
 0.859
pola2
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.852
tmem35a
Transmembrane protein 35.
    
   0.851
cep135
Centrosomal protein 135.
   
 
 0.848
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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