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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG1Pleckstrin homology and RhoGEF domain containing G1. (1572 aa)    
Predicted Functional Partners:
LOC101061216
PID domain-containing protein.
      
 0.623
LOC101075447
Si:dkey-34e4.1.
      
 0.623
LOC101079174
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like isoform X1.
      
 0.623
yap1
Yes-associated protein 1.
    
  0.580
iyd
Iodotyrosine deiodinase.
      
 0.566
fermt2
Fermitin family member 2.
    
 0.557
fermt1
Fermitin family member 1.
    
 0.557
LOC101076287
Ras homolog gene family, member Gd.
    
 0.550
LOC101073689
Ras homolog family member Gb.
    
 0.550
GPR149
G protein-coupled receptor 149.
    
 
 0.549
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.