Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cdv3Carnitine deficiency-associated gene expressed in ventricle 3. (227 aa)    
Predicted Functional Partners:
rmdn1
Regulator of microtubule dynamics 1.
      
 0.701
tmem108
Transmembrane protein 108.
      
 0.624
Serf2
Small EDRK-rich factor 2.
      
 0.623
LOC101076573
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.622
tbcd
Tubulin folding cofactor D.
      
 0.616
dap
Death-associated protein.
      
 0.607
LOC101080185
Proliferation-associated 2G4, b.
   
  
 0.578
pa2g4
Proliferation-associated 2G4, a.
   
  
 0.578
Rps23
Small subunit ribosomal protein S23e.
      
 0.520
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
      
 0.511
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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