Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101070684Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 0.923
rps27a
Ribosomal protein S27a.
   
 0.904
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.895
gcdh
Glutaryl-CoA dehydrogenase a.
 
  
  0.874
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.851
anapc11
APC11 anaphase promoting complex subunit 11 homolog (yeast).
    
 0.850
stub1
STIP1 homology and U-Box containing protein 1.
   
 0.838
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.810
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.793
cul3
Cullin 3a; Belongs to the cullin family.
   
 0.791
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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