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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrs1Ferric-chelate reductase 1a. (652 aa)    
Predicted Functional Partners:
LOC101078768
Mitochondrial ribosomal protein L23.
   
 
 0.773
mrpl46
Mitochondrial ribosomal protein L46.
   
   0.735
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.719
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.708
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.706
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.693
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.692
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.680
mrpl16
Mitochondrial ribosomal protein L16.
   
 
 0.675
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.667
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.