STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061888Slit homolog 1b (Drosophila). (1558 aa)    
Predicted Functional Partners:
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.906
robo2
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.905
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
   
 0.765
ENSTRUP00000074813
Ig-like domain-containing protein.
   
 0.761
LOC101080067
Ig-like domain-containing protein.
   
 0.742
LOC101069145
Ig-like domain-containing protein.
   
 0.742
LOC101061487
Ig-like domain-containing protein.
   
 
 0.614
LOC101075546
Unc-5 netrin receptor C.
   
 
 0.614
LOC101070153
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.575
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.575
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.