STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075534Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)    
Predicted Functional Partners:
tlcd1
TLC domain containing 1.
    
 
 0.667
cbr1
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.609
LOC101065970
Sepiapterin reductase b.
      
 0.566
traf4
TNF receptor-associated factor.
      
 0.563
ENSTRUP00000058204
Hydroxysteroid (17-beta) dehydrogenase 2.
   
 
 0.545
Rimbp2
RIMS-binding protein 2 isoform X1.
      
 0.545
rdh14
Retinol dehydrogenase 14b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.525
rdh12
Retinol dehydrogenase 12.
   
  
 0.520
fdx2
Ferredoxin 2.
   
 0.501
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.501
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.