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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
LOC101077331Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (718 aa)    
Predicted Functional Partners:
tapbp
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.968
LOC101066072
Transporter associated with antigen processing, subunit type a.
  
  
 
0.964
LOC101070568
Transporter associated with antigen processing, subunit type t, teleost specific.
  
  
0.911
pdia3
Protein disulfide-isomerase.
   
 0.871
tapbpl
TAP binding protein like.
   
 
 0.866
LOC101074526
Calreticulin.
   
 0.865
calr
Calreticulin.
   
 0.865
LOC101065848
Proteasome subunit beta 9a.
   
 0.760
LOC101067334
Protein disulfide-isomerase.
   
  0.748
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
   
 0.684
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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