STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076604Tissue specific transplantation antigen P35B. (324 aa)    
Predicted Functional Partners:
gmds
GDP-mannose 4,6-dehydratase.
 0.998
fpgt
Fucose-1-phosphate guanylyltransferase.
     
 0.936
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.915
TSTA3
Tissue specific transplantation antigen P35B.
  
  
 
0.901
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.784
LOC101070351
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
 
 
   0.781
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.766
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.758
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.756
rps10
Ribosomal protein S10.
   
 0.746
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.