Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGFLAMEGF like, fibronectin type III and laminin G domains. (951 aa)    
Predicted Functional Partners:
KATNAL2
Katanin catalytic subunit A1 like 2; Belongs to the AAA ATPase family.
    
 
 0.825
ENSTRUP00000070399
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
    
 
 0.825
LOC101078584
Dystroglycan 1.
   
 0.820
LOC101073584
Peptidase S72 domain-containing protein.
   
 0.820
LOC101061818
LIF receptor subunit alpha a.
   
 0.727
paip1
Poly(A) binding protein interacting protein 1.
    
 
 0.700
LOC101063580
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.623
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.599
ENSTRUP00000069412
annotation not available
    
 0.592
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.592
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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