fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1174 aa)    
Predicted Functional Partners:
pink1
PTEN induced kinase 1.
      
 0.882
park7
Parkinson protein 7.
     
 0.843
spg11
Spatacsin_C domain-containing protein.
      
 0.825
atxn2
Ataxin 2.
   
  
 0.825
fbxo7
F-box protein 7.
   
  
 0.825
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
      
 0.819
prkn
Ubiquitin-like domain-containing protein.
      
 0.791
SNCA
Uncharacterized protein; Belongs to the synuclein family.
   
  
 0.770
LOC101078809
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.760
LOC101078809-2
VPS35 retromer complex component.
    
 
 0.760
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.