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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga3Cyclic nucleotide gated channel subunit alpha 3a. (655 aa)    
Predicted Functional Partners:
LOC101074936
Si:dkey-44k1.5.
  
0.833
LOC101072926
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.774
ENSTRUP00000068713
Cyclic nucleotide-gated cation channel beta-3-like.
  
0.774
guca1b
Guanylate cyclase activating protein 2.
   
 
 0.683
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
      
 0.650
LOC101067484
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
  
 0.629
LOC101068241
Guanylate cyclase.
   
 0.583
stil
STIL centriolar assembly protein.
      
 0.570
LOC101070414
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.
      
 0.565
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.561
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.