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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063574Myosin light chain 4. (202 aa)    
Predicted Functional Partners:
ACTA1
Actin, alpha skeletal muscle A, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
   
 0.939
ACTC1
Actin, alpha skeletal muscle B, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
   
 0.939
LOC101072885
Actin, alpha cardiac muscle, intermediate form; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.
   
 0.939
LOC101072885-2
Actin, alpha anomalous; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
   
 0.939
mylk4
Myosin light chain kinase family, member 4b.
   
 0.930
LOC101072200
Myosin light chain kinase family, member 4a.
   
 0.930
LOC101070888
Myosin, light chain kinase 5.
   
 0.929
tnni1
Troponin I type 1a (skeletal, slow).
   
 0.822
LOC101064268
Uncharacterized protein.
   
 0.791
LOC101071916
Myosin, light chain 2a, regulatory, cardiac, slow.
   
0.791
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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