Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H2SUW0_TAKRUt-SNARE coiled-coil homology domain-containing protein. (284 aa)    
Predicted Functional Partners:
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.987
LOC101071071
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.929
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.914
LOC101079833
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.908
LOC101063708
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.908
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.904
LOC101075501
t-SNARE coiled-coil homology domain-containing protein.
  
  
 
0.901
STX19
Syntaxin 19.
     
 
0.900
LOC101071856
Syntaxin binding protein 5b (tomosyn).
    
 0.887
stxbp5l
Syntaxin binding protein 5-like.
    
 0.887
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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