Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ncoa1Nuclear receptor coactivator 1. (1370 aa)    
Predicted Functional Partners:
LOC101073984
CREB binding protein a.
   
 0.863
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.838
npas4
BHLH domain-containing protein.
    
 0.771
LOC101073582
Nuclear receptor subfamily 1, group H, member 5.
    
 0.768
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.768
rxra
Retinoid X receptor, alpha a.
   
 0.747
LOC101070643
E1A binding protein p300 a.
   
 0.727
ENSTRUP00000064066
E1A binding protein p300 b.
   
 0.727
LOC115248448
E1A binding protein p300 b.
   
 0.727
carm1
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.725
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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