Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
rmnd1Required for meiotic nuclear division 1 homolog. (449 aa)    
Predicted Functional Partners:
utp15
UTP15 small subunit processome component.
      
 0.879
twnk
Twinkle mtDNA helicase.
      
 0.790
tmem70
Transmembrane protein 70.
   
  
 0.731
LOC101072761
UTP14C small subunit processome component.
      
 0.708
eral1
Era-like 12S mitochondrial rRNA chaperone 1.
      
 0.679
prorp
Protein only RNase P catalytic subunit.
   
  
 0.665
hsd17b4
Hydroxysteroid (17-beta) dehydrogenase 4.
   
  
 0.663
mtrf1l
Mitochondrial translational release factor 1-like.
      
 0.654
mtg2
Mitochondrial ribosome-associated GTPase 2.
   
  
 0.652
SLC8B1
Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.649
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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