STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069736Zgc:55558. (187 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
 0.978
araf
Uncharacterized protein.
   
 0.973
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
   
 0.965
sos2
Son of sevenless homolog 2 (Drosophila).
   
 0.965
LOC101073008
RAS guanyl releasing protein 4.
    
 0.955
RASGRP2
RAS guanyl releasing protein 2.
    
 0.955
RASGRP1
RAS guanyl releasing protein 1.
    
 0.955
rassf5
Ras association domain family member 5.
    
 0.955
LOC101066488
Ras protein-specific guanine nucleotide-releasing factor 2a.
    
 0.945
rasgrf2
Ras protein-specific guanine nucleotide-releasing factor 2b.
    
 0.945
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.