STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EML4EMAP like 4. (983 aa)    
Predicted Functional Partners:
alk
Tyrosine-protein kinase receptor.
   
 0.770
LOC101077614
TPR_REGION domain-containing protein.
   
 0.738
NEK9
NIMA related kinase 9.
   
 0.726
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.688
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
   
 0.675
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.666
plk3
Serine/threonine-protein kinase PLK.
   
 0.657
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.632
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.606
mis12
MIS12 kinetochore complex component.
     
 0.588
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.