STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf574Zinc finger protein 526. (1141 aa)    
Predicted Functional Partners:
myct1
Myc target 1b.
      
 0.723
LOC101078763
Sodium/potassium-transporting ATPase subunit alpha.
    
 0.705
plekhj1
Pleckstrin homology domain containing, family J member 1.
    
 0.676
LOC101068307
G-patch domain-containing protein.
      
 0.628
LOC101070020
Zinc finger CCCH-type containing 11A.
      
 0.605
zc3h14
Zinc finger CCCH-type containing 14.
    
 
 0.590
LOC101063965
Golgi glycoprotein 1b.
      
 0.516
LOC101075456
Golgi glycoprotein 1a.
      
 0.516
LOC115252949
Myc target 1a.
      
 0.507
ptp4a1
Protein tyrosine phosphatase 4A1.
      
 0.477
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.