Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb8aZinc finger and BTB domain containing 8A. (470 aa)    
Predicted Functional Partners:
ENSTRUP00000050428
MID1 interacting protein 1.
      
 0.698
zbtb8os
Zinc finger and BTB domain containing 8 opposite strand.
    
 
 0.631
znf276
Zinc finger protein 276.
    
   0.627
hic2
Hypermethylated in cancer 2.
    
   0.533
hic1
Hypermethylated in cancer 1.
    
   0.533
usf3
Upstream transcription factor family member 3.
  
     0.479
mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.442
c4h10orf12-2
Uncharacterized protein.
  
 
   0.433
Casp8ap2
Uncharacterized protein.
  
 
   0.424
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.417
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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