Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115246584Interferon gamma. (189 aa)    
Predicted Functional Partners:
ifngr1-2
Fibronectin type-III domain-containing protein.
     
 0.675
il10
Interleukin 10.
   
  
 0.597
ifngr1
Uncharacterized protein.
      
 0.552
il1b
Interleukin-1; Belongs to the IL-1 family.
      
 0.519
LOC105417731
Uncharacterized protein.
      
 0.515
ENSTRUP00000057515
Uncharacterized protein.
      
 0.454
tpx2
TPX2 microtubule nucleation factor.
      
 0.434
il-2
Interleukin; Belongs to the IL-15/IL-21 family.
      
 0.431
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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