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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cactinCactin. (853 aa)    
Predicted Functional Partners:
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.960
prkrip1
PRKR interacting protein 1.
    
 0.919
slu7
SLU7 homolog, splicing factor.
    
 0.884
fam32a
Family with sequence similarity 32 member A.
    
 0.879
sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.879
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.869
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.858
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.844
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.829
syf2
SYF2 pre-mRNA-splicing factor.
 
  
  0.816
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.