STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC3BLeucine rich repeat containing 3B. (260 aa)    
Predicted Functional Partners:
stox1
Storkhead box 1.
      
 0.617
LOC101069371
Link domain-containing protein.
    
 0.490
Mrvi1
Inositol 1,4,5-triphosphate receptor-associated cGMP kinase substrate.
    
 0.490
cbr4
Carbonyl reductase 4.
    
 
 0.480
gask1b
Golgi associated kinase 1B.
      
 0.476
ENSTRUP00000004667
annotation not available
   
 0.449
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
   
 0.449
LOC101075815
Uncharacterized protein.
   
 0.449
LOC101074464
Junctional adhesion molecule 2b.
   
 0.449
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.449
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.