Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rcn1Reticulocalbin-1; May regulate calcium-dependent activities in the endoplasmic reticulum lumen or post-ER compartment; Belongs to the CREC family. (322 aa)    
Predicted Functional Partners:
LOC101074526
Calreticulin.
   
 
 0.667
calr
Calreticulin.
   
 
 0.667
fam20c1
FAM20C1.
    
  0.654
fam20c2
FAM20C2.
    
  0.654
lamp1
Lysosomal associated membrane protein 1a.
      
 0.642
s100z
Protein S100; Belongs to the S-100 family.
    
 
 0.589
LOC101063222
RING-type domain-containing protein.
      
 0.568
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.566
LOC101070964
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.564
fam20c3
FAM20C3.
    
  0.540
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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