STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061869Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family. (435 aa)    
Predicted Functional Partners:
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
  
  
0.904
p2rx7
Purinergic receptor P2X, ligand-gated ion channel, 7.
     
 0.747
panx2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.707
LOC101070550
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.656
gja1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.638
p2rx1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.599
LOC101064415
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.579
LOC101062626
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.568
gja10
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.539
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 
 0.438
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.